brew install abyss
Genome sequence assembler for short reads
https://www.bcgsc.ca/resources/software/abyss
License: GPL-3.0-only and LGPL-2.1-or-later and MIT and BSD-3-Clause
/api/formula-linux/abyss.json
(JSON API)
Linux formula code on GitHub
Bottle (binary package) installation support provided for Linux platforms:
Intel | big sur | ✅ |
---|---|---|
catalina | ✅ | |
mojave | ✅ | |
high sierra | ✅ | |
64-bit linux | ✅ | |
ARM64 | big sur | ✅ |
Current versions:
stable | ✅ | 2.2.5 |
head | ⚡️ | HEAD |
Revision: 1
Depends on:
open-mpi | 4.1.0 | High performance message passing library |
Depends on when building from source:
boost | 1.75.0 | Collection of portable C++ source libraries |
google-sparsehash | 2.0.4 | Extremely memory-efficient hash_map implementation |
Analytics:
Installs (30 days) | |
---|---|
abyss |
105 |
Installs on Request (30 days) | |
abyss |
105 |
Build Errors (30 days) | |
abyss |
0 |
Installs (90 days) | |
abyss |
607 |
Installs on Request (90 days) | |
abyss |
606 |
Installs (365 days) | |
abyss |
1,562 |
Installs on Request (365 days) | |
abyss |
1,558 |