abyss

Install command:
brew install abyss

Genome sequence assembler for short reads

https://www.bcgsc.ca/resources/software/abyss

License: GPL-3.0-only and LGPL-2.1-or-later and MIT and BSD-3-Clause

/api/formula-linux/abyss.json (JSON API)

Linux formula code on GitHub

Current versions:

stable 2.2.5
head ⚡️ HEAD
bottle 🍾 big_sur, arm64_big_sur, catalina, mojave, high_sierra, x86_64_linux

Depends on:

open-mpi 4.0.5 High performance message passing library

Depends on when building from source:

boost 1.75.0 Collection of portable C++ source libraries
google-sparsehash 2.0.4 Extremely memory-efficient hash_map implementation

Analytics:

Installs (30 days)
abyss 150
Installs on Request (30 days)
abyss 151
Build Errors (30 days)
abyss 0
Installs (90 days)
abyss 537
Installs on Request (90 days)
abyss 538
Installs (365 days)
abyss 1,054
Installs on Request (365 days)
abyss 1,051
Fork me on GitHub