Install command:
brew install abyss

Genome sequence assembler for short reads


License: GPL-3.0-only and LGPL-2.1-or-later and MIT and BSD-3-Clause

/api/formula-linux/abyss.json (JSON API)

/api/bottle-linux/abyss.json (Bottle JSON API)

Linux formula code on GitHub

Bottle (binary package) installation support provided for Linux platforms:

Intel big sur
64-bit linux
ARM64 big sur

Current versions:

stable 2.3.1
head ⚡️ HEAD

Revision: 1

Depends on:

open-mpi 4.1.1 High performance message passing library

Depends on when building from source:

boost 1.76.0 Collection of portable C++ source libraries
google-sparsehash 2.0.4 Extremely memory-efficient hash_map implementation


Installs (30 days)
abyss 64
Installs on Request (30 days)
abyss 64
Build Errors (30 days)
abyss 0
Installs (90 days)
abyss 482
Installs on Request (90 days)
abyss 479
Installs (365 days)
abyss 2,839
Installs on Request (365 days)
abyss 2,839
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