spades

Install command:
brew install spades

De novo genome sequence assembly

https://cab.spbu.ru/software/spades/

License: GPL-2.0-only

/api/formula-linux/spades.json (JSON API)

Linux formula code on GitHub

Bottle (binary package) not available on this platform.

Current versions:

stable 3.15.2

Depends on:

python@3.9 3.9.4 Interpreted, interactive, object-oriented programming language
bzip2 1.0.8 Freely available high-quality data compressor
ncurses 6.2 Text-based UI library
zlib 1.2.11 General-purpose lossless data-compression library
jemalloc 5.2.1 Implementation of malloc emphasizing fragmentation avoidance
readline 8.1 Library for command-line editing

Depends on when building from source:

cmake 3.20.1 Cross-platform make

Analytics:

Installs (30 days)
spades 54
Installs on Request (30 days)
spades 39
Build Errors (30 days)
spades 19
Installs (90 days)
spades 150
Installs on Request (90 days)
spades 112
Installs (365 days)
spades 353
Installs on Request (365 days)
spades 234
Fork me on GitHub