abyss
Genome sequence assembler for short reads
https://www.bcgsc.ca/resources/software/abyss
License: GPL-3.0-only
/api/formula/abyss.json (JSON API)
Formula code on GitHub
Current versions:
| stable | ✅ | 2.2.5 |
| head | ⚡️ | HEAD |
| bottle | 🍾 | catalina, mojave, high_sierra |
Depends on:
| gcc | 10.2.0 | GNU compiler collection |
| open-mpi | 4.0.5 | High performance message passing library |
Depends on when building from source:
| boost | 1.73.0 | Collection of portable C++ source libraries |
| google-sparsehash | 2.0.4 | Extremely memory-efficient hash_map implementation |
Analytics:
| Installs (30 days) | |
|---|---|
abyss |
49 |
| Installs on Request (30 days) | |
abyss |
49 |
| Build Errors (30 days) | |
abyss |
0 |
| Installs (90 days) | |
abyss |
169 |
abyss --HEAD |
7 |
| Installs on Request (90 days) | |
abyss |
167 |
abyss --HEAD |
7 |
| Installs (365 days) | |
abyss |
606 |
abyss --HEAD |
7 |
| Installs on Request (365 days) | |
abyss |
579 |
abyss --HEAD |
7 |
