abyss
Genome sequence assembler for short reads
https://www.bcgsc.ca/resources/gsc-software-centre
/api/formula/abyss.json (JSON API)
Formula code on GitHub
Current versions:
| stable | ✅ | 2.2.3 |
| head | ⚡️ | HEAD |
| bottle | 🍾 | catalina, mojave, high_sierra |
Depends on:
| gcc | 9.2.0 | GNU compiler collection |
| open-mpi | 4.0.2 | High performance message passing library |
Depends on when building from source:
| boost | 1.72.0 | Collection of portable C++ source libraries |
| google-sparsehash | 2.0.3 | Extremely memory-efficient hash_map implementation |
Analytics:
| Installs (30 days) | |
|---|---|
abyss |
34 |
| Installs on Request (30 days) | |
abyss |
32 |
| Build Errors (30 days) | |
abyss |
0 |
| Installs (90 days) | |
abyss |
187 |
| Installs on Request (90 days) | |
abyss |
172 |
| Installs (365 days) | |
abyss |
707 |
| Installs on Request (365 days) | |
abyss |
654 |
