abyss

Genome sequence assembler for short reads

http://www.bcgsc.ca/platform/bioinfo/software/abyss

/api/formula/abyss.json (JSON API)

Formula code on GitHub

Current versions:

stable 2.2.1
head ⚡️ HEAD
bottle 🍾 catalina, mojave, high_sierra, sierra

Depends on:

gcc 9.2.0 GNU compiler collection
open-mpi 4.0.2 High performance message passing library

Depends on when building from source:

boost 1.71.0 Collection of portable C++ source libraries
google-sparsehash 2.0.3 Extremely memory-efficient hash_map implementation

Analytics:

Installs (30 days)
abyss 45
Installs on Request (30 days)
abyss 42
Build Errors (30 days)
abyss 0
Installs (90 days)
abyss 149
Installs on Request (90 days)
abyss 139
Installs (365 days)
abyss 754
Installs on Request (365 days)
abyss 672
Fork me on GitHub