abyss

Genome sequence assembler for short reads

https://www.bcgsc.ca/resources/software/abyss

License: GPL-3.0-only

/api/formula/abyss.json (JSON API)

Formula code on GitHub

Current versions:

stable 2.2.5
head ⚡️ HEAD
bottle 🍾 catalina, mojave, high_sierra

Depends on:

gcc 10.2.0 GNU compiler collection
open-mpi 4.0.5 High performance message passing library

Depends on when building from source:

boost 1.73.0 Collection of portable C++ source libraries
google-sparsehash 2.0.4 Extremely memory-efficient hash_map implementation

Analytics:

Installs (30 days)
abyss 49
Installs on Request (30 days)
abyss 49
Build Errors (30 days)
abyss 0
Installs (90 days)
abyss 169
abyss --HEAD 7
Installs on Request (90 days)
abyss 167
abyss --HEAD 7
Installs (365 days)
abyss 606
abyss --HEAD 7
Installs on Request (365 days)
abyss 579
abyss --HEAD 7
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