abyss

Genome sequence assembler for short reads

http://www.bcgsc.ca/platform/bioinfo/software/abyss

/api/formula/abyss.json (JSON API)

Formula code on GitHub

Current versions:

stable 2.1.4
head ⚡️ HEAD
bottle 🍾 mojave, high_sierra, sierra

Depends on:

gcc 8.2.0 GNU compiler collection
open-mpi 3.1.3 High performance message passing library

Depends on when building from source:

boost 1.68.0 Collection of portable C++ source libraries
google-sparsehash 2.0.3 Extremely memory-efficient hash_map implementation

Analytics:

Installs (30 days)
abyss 153
Installs on Request (30 days)
abyss 122
Build Errors (30 days)
abyss 0
Installs (90 days)
abyss 279
Installs on Request (90 days)
abyss 227
Installs (365 days)
abyss 890
Installs on Request (365 days)
abyss 699
Fork me on GitHub