abyss

Genome sequence assembler for short reads

https://www.bcgsc.ca/resources/software/abyss

/api/formula/abyss.json (JSON API)

Formula code on GitHub

Current versions:

stable 2.2.4
head ⚡️ HEAD
bottle 🍾 catalina, mojave, high_sierra

Depends on:

gcc 9.3.0 GNU compiler collection
open-mpi 4.0.3 High performance message passing library

Depends on when building from source:

boost 1.72.0 Collection of portable C++ source libraries
google-sparsehash 2.0.3 Extremely memory-efficient hash_map implementation

Analytics:

Installs (30 days)
abyss 61
Installs on Request (30 days)
abyss 55
Build Errors (30 days)
abyss 0
Installs (90 days)
abyss 149
Installs on Request (90 days)
abyss 138
Installs (365 days)
abyss 715
Installs on Request (365 days)
abyss 659
Fork me on GitHub