abyss
Install command:
brew install abyssGenome sequence assembler for short reads
https://www.bcgsc.ca/resources/software/abyss
License: GPL-3.0-only and LGPL-2.1-or-later and MIT and BSD-3-Clause
/api/formula/abyss.json (JSON API)
Formula code on GitHub
Bottle (binary package) installation support provided for macOS releases:
| Intel | big sur | ✅ |
|---|---|---|
| catalina | ✅ | |
| mojave | ✅ | |
| high sierra | ✅ | |
| Apple Silicon | big sur | ✅ |
Current versions:
| stable | ✅ | 2.2.5 |
| head | ⚡️ | HEAD |
Depends on:
| open-mpi | 4.1.0 | High performance message passing library |
| gcc | 10.2.0 | GNU compiler collection |
Depends on when building from source:
| boost | 1.75.0 | Collection of portable C++ source libraries |
| google-sparsehash | 2.0.4 | Extremely memory-efficient hash_map implementation |
Analytics:
| Installs (30 days) | |
|---|---|
abyss |
31 |
| Installs on Request (30 days) | |
abyss |
31 |
| Build Errors (30 days) | |
abyss |
3 |
| Installs (90 days) | |
abyss |
113 |
| Installs on Request (90 days) | |
abyss |
113 |
| Installs (365 days) | |
abyss |
533 |
abyss --HEAD |
7 |
| Installs on Request (365 days) | |
abyss |
526 |
abyss --HEAD |
7 |
