Install command:
brew install abyss

Genome sequence assembler for short reads


License: GPL-3.0-only and LGPL-2.1-or-later and MIT and BSD-3-Clause

/api/formula/abyss.json (JSON API)

Formula code on GitHub

Bottle (binary package) installation support provided for macOS releases:

Intel big sur
high sierra
Apple Silicon big sur

Current versions:

stable 2.2.5
head ⚡️ HEAD

Depends on:

open-mpi 4.1.0 High performance message passing library
gcc 10.2.0 GNU compiler collection

Depends on when building from source:

boost 1.75.0 Collection of portable C++ source libraries
google-sparsehash 2.0.4 Extremely memory-efficient hash_map implementation


Installs (30 days)
abyss 31
Installs on Request (30 days)
abyss 31
Build Errors (30 days)
abyss 3
Installs (90 days)
abyss 113
Installs on Request (90 days)
abyss 113
Installs (365 days)
abyss 533
abyss --HEAD 7
Installs on Request (365 days)
abyss 526
abyss --HEAD 7
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