abyss
Genome sequence assembler for short reads
http://www.bcgsc.ca/platform/bioinfo/software/abyss
/api/formula/abyss.json (JSON API)
Formula code on GitHub
Current versions:
| stable | ✅ | 2.1.1 |
| head | ⚡️ | HEAD |
| bottle | 🍾 | mojave, high_sierra, sierra, el_capitan |
Depends on:
| gcc | ✅ | 8.2.0 | GNU compiler collection |
| open-mpi | ✅ | 3.1.2 | High performance message passing library |
Depends on when building from source:
| boost | ✅ | 1.67.0 | Collection of portable C++ source libraries |
| google-sparsehash | ✅ | 2.0.3 | Extremely memory-efficient hash_map implementation |
Analytics:
| Installs (30 days) | |
|---|---|
abyss |
68 |
| Installs on Request (30 days) | |
abyss |
53 |
| Build Errors (30 days) | |
abyss # |
1 |
abyss # |
1 |
| Installs (90 days) | |
abyss |
240 |
| Installs on Request (90 days) | |
abyss |
170 |
| Installs (365 days) | |
abyss |
662 |
| Installs on Request (365 days) | |
abyss |
497 |
