abyss

Install command: 
brew install abyss

Genome sequence assembler for short reads

https://www.bcgsc.ca/resources/software/abyss

License: GPL-3.0-only AND LGPL-2.1-or-later AND MIT AND BSD-3-Clause

Formula JSON API: /api/formula/abyss.json

Formula code: abyss.rb on GitHub

Bottle (binary package) installation support provided for:

macOS on
Apple Silicon		 tahoe ✅
sequoia ✅
sonoma ✅
macOS on
Intel		 sonoma ✅
Linux ARM64 ✅
x86_64 ✅

Current versions:

stable ✅ 2.3.10
head ⚡️ HEAD

Revision: 1

Depends on:

btllib 1.7.5 Bioinformatics Technology Lab common code library
open-mpi 5.0.8 High performance message passing library
libomp 21.1.5 LLVM's OpenMP runtime library

Depends on when building from source:

boost 1.89.0 Collection of portable C++ source libraries
google-sparsehash 2.0.4 Extremely memory-efficient hash_map implementation

Analytics:

Installs (30 days)
abyss 43
Installs on Request (30 days)
abyss 40
Build Errors (30 days)
abyss 2
Installs (90 days)
abyss 113
Installs on Request (90 days)
abyss 107
Installs (365 days)
abyss 348
Installs on Request (365 days)
abyss 333