bcftools
Install command:
brew install bcftoolsTools for BCF/VCF files and variant calling from samtools
License: GPL-3.0-or-later
Development: Pull requests
Formula JSON API: /api/formula/bcftools.json
Formula code: bcftools.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
golden gate | ✅ |
|---|---|---|
| tahoe | ✅ | |
| sequoia | ✅ | |
| sonoma | ✅ | |
| macOS on Intel |
sonoma | ✅ |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ |
Current versions:
| stable | ✅ | 1.24 |
Depends on:
| gsl | 2.8 | Numerical library for C and C++ |
| htslib | 1.24 | C library for high-throughput sequencing data formats |
Binaries:
bcftools,
color-chrs.pl,
gff2gff,
gff2gff.py,
guess-ploidy.py,
plot-roh.py,
plot-vcfstats,
roh-viz,
run-roh.pl,
vcfutils.pl,
vrfs-variances
Analytics:
| 30 days | 90 days | 365 days | |
|---|---|---|---|
| Installs | 161 | 765 | 3,050 |
Installs (--HEAD) | 0 | 0 | 2 |
| Installs on Request | 160 | 757 | 3,032 |
Installs on Request (--HEAD) | 0 | 0 | 2 |
| Build Errors | 0 |