bioperl
brew install bioperlPerl tools for bioinformatics, genomics and life science
License: Artistic-1.0-Perl OR GPL-1.0-or-later
Development: Pull requests
Formula JSON API: /api/formula/bioperl.json
Formula code: bioperl.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
tahoe | ✅ |
|---|---|---|
| sequoia | ✅ | |
| sonoma | ✅ | |
| macOS on Intel |
tahoe | ✅ |
| sequoia | ✅ | |
| sonoma | ✅ | |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ |
Current versions:
| stable | ✅ | 1.7.8 |
| head | ⚡️ | HEAD |
Revision: 7
Depends on when building from source:
| pkgconf | 3.0.6 | Package compiler and linker metadata toolkit |
Uses from macOS: expat, libxml2, perl
Binaries:
bp_aacomp,
bp_bioflat_index,
bp_biogetseq,
bp_dbsplit,
bp_extract_feature_seq,
bp_fastam9_to_table,
bp_fetch,
bp_filter_search,
bp_find-blast-matches,
bp_gccalc,
bp_genbank2gff3,
bp_index,
bp_local_taxonomydb_query,
bp_make_mrna_protein,
bp_mask_by_search,
bp_mrtrans,
bp_mutate,
bp_nexus2nh,
bp_nrdb,
bp_oligo_count,
bp_process_gadfly,
bp_process_sgd,
bp_revtrans-motif,
bp_search2alnblocks,
bp_search2gff,
bp_search2table,
bp_search2tribe,
bp_seq_length,
bp_seqconvert,
bp_seqcut,
bp_seqpart,
bp_seqret,
bp_seqretsplit,
bp_split_seq,
bp_sreformat,
bp_taxid4species,
bp_taxonomy2tree,
bp_translate_seq,
bp_tree2pag,
bp_unflatten_seq
Analytics:
| 30 days | 90 days | 365 days | |
|---|---|---|---|
| Installs | 43 | 140 | 582 |
Installs (--HEAD) | 0 | 0 | 1 |
| Installs on Request | 23 | 107 | 356 |
Installs on Request (--HEAD) | 0 | 0 | 1 |
| Build Errors | 0 |