blast
brew install blastBasic Local Alignment Search Tool
https://blast.ncbi.nlm.nih.gov/
License: LicenseRef-Homebrew-public-domain
Development: Pull requests
Formula JSON API: /api/formula/blast.json
Formula code: blast.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
tahoe | ✅ |
|---|---|---|
| sequoia | ✅ | |
| sonoma | ✅ | |
| macOS on Intel |
sonoma | ✅ |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ | |
Current versions:
| stable | ✅ | 2.17.0 |
Revision: 1
Depends on:
| lmdb | 1.0.1 | Lightning memory-mapped database: key-value data store |
| mbedtls@3 | 3.6.7 | Cryptographic & SSL/TLS library |
| pcre2 | 10.47 | Perl compatible regular expressions library with a new API |
| libomp | 23.1.0 | LLVM's OpenMP runtime library |
Uses from macOS: cpio (build), bzip2, sqlite
Conflicts with: proj (because both install a `libproj.a` library)
Binaries:
blast_formatter,
blastdb_aliastool,
blastdb_convert,
blastdb_path,
blastdbcheck,
blastdbcmd,
blastdbcp,
blastn,
blastp,
blastx,
cleanup-blastdb-volumes.py,
convert2blastmask,
datatool,
deltablast,
dustmasker,
gc_cli,
get_species_taxids.sh,
legacy_blast.pl,
lmdbxx_sample,
makeblastdb,
makeclusterdb,
makembindex,
makeprofiledb,
project_tree_builder,
psiblast,
rpsblast,
rpstblastn,
run_with_lock,
seedtop,
segmasker,
seqdb_demo,
tax4blast,
tblastn,
tblastx,
update_blastdb.pl,
windowmasker,
windowmasker_2.2.22_adapter.py
Analytics:
| 30 days | 90 days | 365 days | |
|---|---|---|---|
| Installs | 246 | 682 | 3,789 |
Installs (--HEAD) | 0 | 0 | 1 |
| Installs on Request | 235 | 638 | 3,567 |
Installs on Request (--HEAD) | 0 | 0 | 1 |
| Build Errors | 31 |