bowtie2

Install command:
brew install bowtie2

Fast and sensitive gapped read aligner

https://bowtie-bio.sourceforge.net/bowtie2/index.shtml

License: GPL-3.0-or-later

Formula JSON API: /api/formula/bowtie2.json

Formula code: bowtie2.rb on GitHub

Bottle (binary package) installation support provided for:

Apple Silicon sonoma
ventura
monterey
Intel sonoma
ventura
monterey
64-bit linux

Current versions:

stable 2.5.4

Depends on when building from source:

simde 0.8.2 Implementations of SIMD intrinsics for systems which don't natively support them

Analytics:

Installs (30 days)
bowtie2 255
Installs on Request (30 days)
bowtie2 246
Build Errors (30 days)
bowtie2 0
Installs (90 days)
bowtie2 545
Installs on Request (90 days)
bowtie2 531
Installs (365 days)
bowtie2 2,424
bowtie2 --HEAD 2
Installs on Request (365 days)
bowtie2 2,359
bowtie2 --HEAD 2
Fork me on GitHub