brew install bowtie2
Fast and sensitive gapped read aligner
https://bowtie-bio.sourceforge.io/bowtie2/
License: GPL-3.0-or-later
Formula JSON API: /api/formula/bowtie2.json
Bottle JSON API: /api/bottle/bowtie2.json
Formula code: bowtie2.rb
on GitHub
Bottle (binary package) installation support provided for:
Intel | monterey | ✅ |
---|---|---|
big sur | ✅ | |
catalina | ✅ | |
64-bit linux | ✅ | |
Apple Silicon | monterey | ✅ |
big sur | ✅ |
Current versions:
stable | ✅ | 2.4.5 |
Depends on:
simde | 0.7.2 | Implementations of SIMD intrinsics for systems which don't natively support them |
tbb | 2021.5.0 | Rich and complete approach to parallelism in C++ |
Analytics (macOS):
Installs (30 days) | |
---|---|
bowtie2 |
232 |
Installs on Request (30 days) | |
bowtie2 |
219 |
Build Errors (30 days) | |
bowtie2 |
0 |
Installs (90 days) | |
bowtie2 |
789 |
Installs on Request (90 days) | |
bowtie2 |
733 |
Installs (365 days) | |
bowtie2 |
3,466 |
Installs on Request (365 days) | |
bowtie2 |
3,175 |
Analytics (Linux):
Installs (30 days) | |
---|---|
bowtie2 |
35 |
Installs on Request (30 days) | |
bowtie2 |
31 |
Build Errors (30 days) | |
bowtie2 |
0 |
Installs (90 days) | |
bowtie2 |
79 |
Installs on Request (90 days) | |
bowtie2 |
65 |
Installs (365 days) | |
bowtie2 |
304 |
Installs on Request (365 days) | |
bowtie2 |
235 |