bowtie2
Install command:
brew install bowtie2Fast and sensitive gapped read aligner
https://bowtie-bio.sourceforge.io/bowtie2/
License: GPL-3.0-or-later
Formula JSON API: /api/formula/bowtie2.json
Bottle JSON API: /api/bottle/bowtie2.json
Formula code: bowtie2.rb on GitHub
Bottle (binary package) installation support provided for:
| Intel | monterey | ✅ |
|---|---|---|
| big sur | ✅ | |
| catalina | ✅ | |
| 64-bit linux | ✅ | |
| Apple Silicon | monterey | ✅ |
| big sur | ✅ | |
Current versions:
| stable | ✅ | 2.4.5 |
Depends on:
| simde | 0.7.2 | Implementations of SIMD intrinsics for systems which don't natively support them |
| tbb | 2021.5.0 | Rich and complete approach to parallelism in C++ |
Analytics (macOS):
| Installs (30 days) | |
|---|---|
bowtie2 |
232 |
| Installs on Request (30 days) | |
bowtie2 |
219 |
| Build Errors (30 days) | |
bowtie2 |
0 |
| Installs (90 days) | |
bowtie2 |
789 |
| Installs on Request (90 days) | |
bowtie2 |
733 |
| Installs (365 days) | |
bowtie2 |
3,466 |
| Installs on Request (365 days) | |
bowtie2 |
3,175 |
Analytics (Linux):
| Installs (30 days) | |
|---|---|
bowtie2 |
35 |
| Installs on Request (30 days) | |
bowtie2 |
31 |
| Build Errors (30 days) | |
bowtie2 |
0 |
| Installs (90 days) | |
bowtie2 |
79 |
| Installs on Request (90 days) | |
bowtie2 |
65 |
| Installs (365 days) | |
bowtie2 |
304 |
| Installs on Request (365 days) | |
bowtie2 |
235 |
