bowtie2
Install command:
brew install bowtie2Fast and sensitive gapped read aligner
https://bowtie-bio.sourceforge.net/bowtie2/index.shtml
License: GPL-3.0-or-later
Development: Pull requests
Formula JSON API: /api/formula/bowtie2.json
Formula code: bowtie2.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
tahoe | ✅ |
|---|---|---|
| sequoia | ✅ | |
| sonoma | ✅ | |
| macOS on Intel |
sonoma | ✅ |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ | |
Current versions:
| stable | ✅ | 2.5.5 |
Depends on when building from source:
| simde | 0.8.2 | Implementations of SIMD intrinsics for systems which don't natively support them |
Analytics:
| Installs (30 days) | |
|---|---|
bowtie2 |
90 |
bowtie2 --HEAD |
1 |
| Installs on Request (30 days) | |
bowtie2 |
82 |
bowtie2 --HEAD |
1 |
| Build Errors (30 days) | |
bowtie2 |
2 |
| Installs (90 days) | |
bowtie2 |
340 |
bowtie2 --HEAD |
2 |
| Installs on Request (90 days) | |
bowtie2 |
306 |
bowtie2 --HEAD |
2 |
| Installs (365 days) | |
bowtie2 |
1,034 |
bowtie2 --HEAD |
5 |
| Installs on Request (365 days) | |
bowtie2 |
940 |
bowtie2 --HEAD |
5 |