bowtie2

Fast and sensitive gapped read aligner

https://bowtie-bio.sourceforge.io/

Current versions:

stable 2.3.4.1
bottle 🍾 high_sierra, sierra, el_capitan

Depends on:

tbb 2018_U3 Rich and complete approach to parallelism in C++

JSON API for bowtie2

Formula code on GitHub

Fork me on GitHub