bowtie2
Install command:
brew install bowtie2Fast and sensitive gapped read aligner
https://bowtie-bio.sourceforge.net/bowtie2/index.shtml
License: GPL-3.0-or-later
Formula JSON API: /api/formula/bowtie2.json
Formula code: bowtie2.rb on GitHub
Bottle (binary package) installation support provided for:
| Apple Silicon | sonoma | ✅ |
|---|---|---|
| ventura | ✅ | |
| monterey | ✅ | |
| Intel | sonoma | ✅ |
| ventura | ✅ | |
| monterey | ✅ | |
| 64-bit linux | ✅ | |
Current versions:
| stable | ✅ | 2.5.3 |
Depends on when building from source:
| simde | 0.8.0 | Implementations of SIMD intrinsics for systems which don't natively support them |
Analytics:
| Installs (30 days) | |
|---|---|
bowtie2 |
123 |
| Installs on Request (30 days) | |
bowtie2 |
117 |
| Build Errors (30 days) | |
bowtie2 |
0 |
| Installs (90 days) | |
bowtie2 |
523 |
| Installs on Request (90 days) | |
bowtie2 |
507 |
| Installs (365 days) | |
bowtie2 |
2,417 |
bowtie2 --HEAD |
3 |
| Installs on Request (365 days) | |
bowtie2 |
2,351 |
bowtie2 --HEAD |
3 |
