jellyfish
Install command:
brew install jellyfishFast, memory-efficient counting of DNA k-mers
http://www.genome.umd.edu/jellyfish.html
License: BSD-3-Clause or GPL-3.0-or-later
Formula JSON API: /api/formula/jellyfish.json
Formula code: jellyfish.rb on GitHub
Bottle (binary package) installation support provided for:
| Apple Silicon | sonoma | ✅ |
|---|---|---|
| ventura | ✅ | |
| monterey | ✅ | |
| big sur | ✅ | |
| Intel | sonoma | ✅ |
| ventura | ✅ | |
| monterey | ✅ | |
| big sur | ✅ | |
| catalina | ✅ | |
| mojave | ✅ | |
| 64-bit linux | ✅ | |
Current versions:
| stable | ✅ | 2.3.0 |
Depends on:
| htslib | 1.18 | C library for high-throughput sequencing data formats |
Depends on when building from source:
| autoconf@2.69 | 2.69 | Automatic configure script builder |
| automake | 1.16.5 | Tool for generating GNU Standards-compliant Makefiles |
| gettext | 0.22.2 | GNU internationalization (i18n) and localization (l10n) library |
| libtool | 2.4.7 | Generic library support script |
| pkg-config | 0.29.2 | Manage compile and link flags for libraries |
Analytics:
| Installs (30 days) | |
|---|---|
jellyfish |
24 |
| Installs on Request (30 days) | |
jellyfish |
18 |
| Build Errors (30 days) | |
jellyfish |
0 |
| Installs (90 days) | |
jellyfish |
67 |
| Installs on Request (90 days) | |
jellyfish |
55 |
| Installs (365 days) | |
jellyfish |
122 |
| Installs on Request (365 days) | |
jellyfish |
92 |
