jellyfish

Install command:
brew install jellyfish

Fast, memory-efficient counting of DNA k-mers

http://www.genome.umd.edu/jellyfish.html

License: BSD-3-Clause or GPL-3.0-or-later

Formula JSON API: /api/formula/jellyfish.json

Formula code: jellyfish.rb on GitHub

Bottle (binary package) installation support provided for:

Apple Silicon sonoma
ventura
monterey
big sur
Intel sonoma
ventura
monterey
big sur
catalina
mojave
64-bit linux

Current versions:

stable 2.3.0

Depends on:

htslib 1.18 C library for high-throughput sequencing data formats

Depends on when building from source:

autoconf@2.69 2.69 Automatic configure script builder
automake 1.16.5 Tool for generating GNU Standards-compliant Makefiles
gettext 0.22.2 GNU internationalization (i18n) and localization (l10n) library
libtool 2.4.7 Generic library support script
pkg-config 0.29.2 Manage compile and link flags for libraries

Analytics:

Installs (30 days)
jellyfish 24
Installs on Request (30 days)
jellyfish 18
Build Errors (30 days)
jellyfish 0
Installs (90 days)
jellyfish 67
Installs on Request (90 days)
jellyfish 55
Installs (365 days)
jellyfish 122
Installs on Request (365 days)
jellyfish 92
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