brew install jellyfish
Fast, memory-efficient counting of DNA k-mers
http://www.genome.umd.edu/jellyfish.html
License: BSD-3-Clause or GPL-3.0-or-later
Formula JSON API: /api/formula/jellyfish.json
Formula code: jellyfish.rb
on GitHub
Bottle (binary package) installation support provided for:
Intel | ventura | ✅ |
---|---|---|
monterey | ✅ | |
big sur | ✅ | |
catalina | ✅ | |
mojave | ✅ | |
64-bit linux | ✅ | |
Apple Silicon | ventura | ✅ |
monterey | ✅ | |
big sur | ✅ |
Current versions:
stable | ✅ | 2.3.0 |
Depends on:
htslib | 1.17 | C library for high-throughput sequencing data formats |
Depends on when building from source:
autoconf@2.69 | 2.69 | Automatic configure script builder |
automake | 1.16.5 | Tool for generating GNU Standards-compliant Makefiles |
gettext | 0.21.1 | GNU internationalization (i18n) and localization (l10n) library |
libtool | 2.4.7 | Generic library support script |
pkg-config | 0.29.2 | Manage compile and link flags for libraries |
Analytics:
Installs (30 days) | |
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jellyfish |
0 |
Installs on Request (30 days) | |
jellyfish |
0 |
Build Errors (30 days) | |
jellyfish |
0 |
Analytics (macOS):
Installs (90 days) | |
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jellyfish |
1 |
Installs on Request (90 days) | |
jellyfish |
0 |
Installs (365 days) | |
jellyfish |
177 |
Installs on Request (365 days) | |
jellyfish |
132 |
Analytics (Linux):
Installs (90 days) | |
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jellyfish |
0 |
Installs on Request (90 days) | |
jellyfish |
0 |
Installs (365 days) | |
jellyfish |
42 |
Installs on Request (365 days) | |
jellyfish |
10 |