jellyfish

Install command:
brew install jellyfish

Fast, memory-efficient counting of DNA k-mers

http://www.genome.umd.edu/jellyfish.html

License: BSD-3-Clause or GPL-3.0-or-later

Formula JSON API: /api/formula/jellyfish.json

Bottle JSON API: /api/bottle/jellyfish.json

Formula code: jellyfish.rb on GitHub

Bottle (binary package) installation support provided for:

Intel monterey
big sur
catalina
mojave
64-bit linux
Apple Silicon monterey
big sur

Current versions:

stable 2.3.0

Depends on:

htslib 1.14 C library for high-throughput sequencing data formats

Depends on when building from source:

autoconf@2.69 2.69 Automatic configure script builder
automake 1.16.5 Tool for generating GNU Standards-compliant Makefiles
gettext 0.21 GNU internationalization (i18n) and localization (l10n) library
libtool 2.4.6 Generic library support script
pkg-config 0.29.2 Manage compile and link flags for libraries

Analytics (macOS):

Installs (30 days)
jellyfish 41
Installs on Request (30 days)
jellyfish 36
Build Errors (30 days)
jellyfish 2
Installs (90 days)
jellyfish 62
Installs on Request (90 days)
jellyfish 55
Installs (365 days)
jellyfish 62
Installs on Request (365 days)
jellyfish 55

Analytics (Linux):

Installs (30 days)
jellyfish 5
Installs on Request (30 days)
jellyfish 2
Build Errors (30 days)
jellyfish 0
Installs (90 days)
jellyfish 11
Installs on Request (90 days)
jellyfish 3
Installs (365 days)
jellyfish 11
Installs on Request (365 days)
jellyfish 3
Fork me on GitHub