kallisto

Install command:
brew install kallisto

Quantify abundances of transcripts from RNA-Seq data

https://pachterlab.github.io/kallisto/

License: BSD-2-Clause

Formula JSON API: /api/formula/kallisto.json

Bottle JSON API: /api/bottle/kallisto.json

Formula code: kallisto.rb on GitHub

Bottle (binary package) installation support provided for:

Intel monterey
big sur
catalina
64-bit linux
Apple Silicon monterey
big sur

Current versions:

stable 0.48.0

Depends on:

hdf5 1.12.2 File format designed to store large amounts of data

Depends on when building from source:

autoconf@2.69 2.69 Automatic configure script builder
automake 1.16.5 Tool for generating GNU Standards-compliant Makefiles
cmake 3.23.2 Cross-platform make

Analytics (macOS):

Installs (30 days)
kallisto 102
Installs on Request (30 days)
kallisto 101
Build Errors (30 days)
kallisto 0
Installs (90 days)
kallisto 290
Installs on Request (90 days)
kallisto 289
Installs (365 days)
kallisto 1,094
Installs on Request (365 days)
kallisto 1,092

Analytics (Linux):

Installs (30 days)
kallisto 6
Installs on Request (30 days)
kallisto 6
Build Errors (30 days)
kallisto 0
Installs (90 days)
kallisto 15
Installs on Request (90 days)
kallisto 14
Installs (365 days)
kallisto 77
Installs on Request (365 days)
kallisto 75
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