brew install kallisto
Quantify abundances of transcripts from RNA-Seq data
https://pachterlab.github.io/kallisto/
License: BSD-2-Clause
/api/formula/kallisto.json
(JSON API)
Formula code on GitHub
Bottle (binary package) installation support provided for macOS releases:
Intel | big sur | ✅ |
---|---|---|
catalina | ✅ | |
mojave | ✅ | |
high sierra | ✅ | |
Apple Silicon | big sur | ✅ |
Current versions:
stable | ✅ | 0.46.2 |
Depends on:
hdf5 | 1.12.0 | File format designed to store large amounts of data |
Depends on when building from source:
autoconf | 2.69 | Automatic configure script builder |
automake | 1.16.3 | Tool for generating GNU Standards-compliant Makefiles |
cmake | 3.19.6 | Cross-platform make |
Analytics:
Installs (30 days) | |
---|---|
kallisto |
100 |
Installs on Request (30 days) | |
kallisto |
100 |
Build Errors (30 days) | |
kallisto |
0 |
Installs (90 days) | |
kallisto |
279 |
Installs on Request (90 days) | |
kallisto |
279 |
Installs (365 days) | |
kallisto |
1,616 |
Installs on Request (365 days) | |
kallisto |
1,606 |