kallisto
Install command:
brew install kallistoQuantify abundances of transcripts from RNA-Seq data
https://pachterlab.github.io/kallisto/
License: BSD-2-Clause
/api/formula/kallisto.json (JSON API)
/api/bottle/kallisto.json (Bottle JSON API)
Formula code on GitHub
Bottle (binary package) installation support provided for macOS releases:
| Intel | big sur | ✅ |
|---|---|---|
| catalina | ✅ | |
| mojave | ✅ | |
| high sierra | ✅ | |
| 64-bit linux | ✅ | |
| Apple Silicon | big sur | ✅ |
Current versions:
| stable | ✅ | 0.46.2 |
Depends on:
| hdf5 | 1.12.1 | File format designed to store large amounts of data |
Depends on when building from source:
| autoconf@2.69 | 2.69 | Automatic configure script builder |
| automake | 1.16.5 | Tool for generating GNU Standards-compliant Makefiles |
| cmake | 3.21.3 | Cross-platform make |
Analytics:
| Installs (30 days) | |
|---|---|
kallisto |
87 |
| Installs on Request (30 days) | |
kallisto |
87 |
| Build Errors (30 days) | |
kallisto |
0 |
| Installs (90 days) | |
kallisto |
236 |
| Installs on Request (90 days) | |
kallisto |
235 |
| Installs (365 days) | |
kallisto |
1,101 |
| Installs on Request (365 days) | |
kallisto |
1,098 |
