kallisto
Install command:
brew install kallistoQuantify abundances of transcripts from RNA-Seq data
https://pachterlab.github.io/kallisto/
License: BSD-2-Clause
Formula JSON API: /api/formula/kallisto.json
Formula code: kallisto.rb on GitHub
Bottle (binary package) installation support provided for:
| Apple Silicon | sonoma | ✅ |
|---|---|---|
| ventura | ✅ | |
| monterey | ✅ | |
| Intel | sonoma | ✅ |
| ventura | ✅ | |
| monterey | ✅ | |
| 64-bit linux | ✅ | |
Current versions:
| stable | ✅ | 0.51.0 |
Depends on:
| hdf5 | 1.14.3 | File format designed to store large amounts of data |
Depends on when building from source:
| cmake | 3.30.1 | Cross-platform make |
Analytics:
| Installs (30 days) | |
|---|---|
kallisto |
89 |
| Installs on Request (30 days) | |
kallisto |
89 |
| Build Errors (30 days) | |
kallisto |
0 |
| Installs (90 days) | |
kallisto |
221 |
| Installs on Request (90 days) | |
kallisto |
221 |
| Installs (365 days) | |
kallisto |
1,040 |
| Installs on Request (365 days) | |
kallisto |
1,039 |
