kallisto

Quantify abundances of transcripts from RNA-Seq data

https://pachterlab.github.io/kallisto/

Current versions:

stable 0.44.0
bottle 🍾 high_sierra, sierra, el_capitan

Revision: 1

Depends on:

hdf5 1.10.2 File format designed to store large amounts of data

Depends on when building from source:

autoconf 2.69 Automatic configure script builder
automake 1.16.1 Tool for generating GNU Standards-compliant Makefiles
cmake 3.11.2 Cross-platform make

JSON API for kallisto

Formula code on GitHub

Fork me on GitHub