kallisto

Install command:
brew install kallisto

Quantify abundances of transcripts from RNA-Seq data

https://pachterlab.github.io/kallisto/

License: BSD-2-Clause

Formula JSON API: /api/formula/kallisto.json

Formula code: kallisto.rb on GitHub

Bottle (binary package) installation support provided for:

Apple Silicon sonoma
ventura
monterey
Intel sonoma
ventura
monterey
64-bit linux

Current versions:

stable 0.50.1

Depends on:

hdf5 1.14.3 File format designed to store large amounts of data

Depends on when building from source:

cmake 3.27.8 Cross-platform make

Analytics:

Installs (30 days)
kallisto 171
Installs on Request (30 days)
kallisto 170
Build Errors (30 days)
kallisto 14
Installs (90 days)
kallisto 403
Installs on Request (90 days)
kallisto 402
Installs (365 days)
kallisto 1,338
Installs on Request (365 days)
kallisto 1,337
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