kallisto

Quantify abundances of transcripts from RNA-Seq data

https://pachterlab.github.io/kallisto/

Current versions:

stable ✅ 0.44.0
bottle 🍾 high_sierra, sierra, el_capitan

Revision: 1

Depends on:

hdf5 ✅ 1.10.2 File format designed to store large amounts of data

Depends on when building from source:

autoconf ✅ 2.69 Automatic configure script builder
automake ✅ 1.16.1 Tool for generating GNU Standards-compliant Makefiles
cmake ✅ 3.11.2 Cross-platform make

JSON API for kallisto

Formula code on GitHub

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