kallisto

Install command:
brew install kallisto

Quantify abundances of transcripts from RNA-Seq data

https://pachterlab.github.io/kallisto/

License: BSD-2-Clause

Formula JSON API: /api/formula/kallisto.json

Formula code: kallisto.rb on GitHub

Bottle (binary package) installation support provided for:

Apple Silicon sonoma
ventura
monterey
Intel sonoma
ventura
monterey
64-bit linux

Current versions:

stable 0.50.1

Depends on:

hdf5 1.14.3 File format designed to store large amounts of data

Depends on when building from source:

cmake 3.29.3 Cross-platform make

Analytics:

Installs (30 days)
kallisto 81
Installs on Request (30 days)
kallisto 81
Build Errors (30 days)
kallisto 0
Installs (90 days)
kallisto 215
Installs on Request (90 days)
kallisto 215
Installs (365 days)
kallisto 1,281
Installs on Request (365 days)
kallisto 1,280
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