kallisto
Install command:
brew install kallistoQuantify abundances of transcripts from RNA-Seq data
https://pachterlab.github.io/kallisto/
License: BSD-2-Clause
Development: Pull requests
Formula JSON API: /api/formula/kallisto.json
Formula code: kallisto.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
tahoe | ✅ |
|---|---|---|
| sequoia | ✅ | |
| sonoma | ✅ | |
| macOS on Intel |
sonoma | ✅ |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ | |
Current versions:
| stable | ✅ | 0.51.1 |
Revision: 2
Depends on:
| hdf5 | 2.0.0 | File format designed to store large amounts of data |
Depends on when building from source:
| cmake | 4.2.3 | Cross-platform make |
Analytics:
| Installs (30 days) | |
|---|---|
kallisto |
52 |
| Installs on Request (30 days) | |
kallisto |
52 |
| Build Errors (30 days) | |
kallisto |
0 |
| Installs (90 days) | |
kallisto |
103 |
| Installs on Request (90 days) | |
kallisto |
103 |
| Installs (365 days) | |
kallisto |
412 |
kallisto --HEAD |
1 |
| Installs on Request (365 days) | |
kallisto |
410 |
kallisto --HEAD |
1 |