kallisto
Install command:
brew install kallistoQuantify abundances of transcripts from RNA-Seq data
https://pachterlab.github.io/kallisto/
License: BSD-2-Clause
Formula JSON API: /api/formula/kallisto.json
Bottle JSON API: /api/bottle/kallisto.json
Formula code: kallisto.rb on GitHub
Bottle (binary package) installation support provided for:
| Intel | monterey | ✅ |
|---|---|---|
| big sur | ✅ | |
| catalina | ✅ | |
| 64-bit linux | ✅ | |
| Apple Silicon | monterey | ✅ |
| big sur | ✅ | |
Current versions:
| stable | ✅ | 0.48.0 |
Depends on:
| hdf5 | 1.12.2 | File format designed to store large amounts of data |
Depends on when building from source:
| autoconf@2.69 | 2.69 | Automatic configure script builder |
| automake | 1.16.5 | Tool for generating GNU Standards-compliant Makefiles |
| cmake | 3.23.2 | Cross-platform make |
Analytics (macOS):
| Installs (30 days) | |
|---|---|
kallisto |
102 |
| Installs on Request (30 days) | |
kallisto |
101 |
| Build Errors (30 days) | |
kallisto |
0 |
| Installs (90 days) | |
kallisto |
290 |
| Installs on Request (90 days) | |
kallisto |
289 |
| Installs (365 days) | |
kallisto |
1,094 |
| Installs on Request (365 days) | |
kallisto |
1,092 |
Analytics (Linux):
| Installs (30 days) | |
|---|---|
kallisto |
6 |
| Installs on Request (30 days) | |
kallisto |
6 |
| Build Errors (30 days) | |
kallisto |
0 |
| Installs (90 days) | |
kallisto |
15 |
| Installs on Request (90 days) | |
kallisto |
14 |
| Installs (365 days) | |
kallisto |
77 |
| Installs on Request (365 days) | |
kallisto |
75 |
