brew install kallisto
Quantify abundances of transcripts from RNA-Seq data
https://pachterlab.github.io/kallisto/
License: BSD-2-Clause
Formula JSON API: /api/formula/kallisto.json
Formula code: kallisto.rb
on GitHub
Bottle (binary package) installation support provided for:
Apple Silicon | sonoma | ✅ |
---|---|---|
ventura | ✅ | |
monterey | ✅ | |
Intel | sonoma | ✅ |
ventura | ✅ | |
monterey | ✅ | |
64-bit linux | ✅ |
Current versions:
stable | ✅ | 0.50.1 |
Depends on:
hdf5 | 1.14.3 | File format designed to store large amounts of data |
Depends on when building from source:
cmake | 3.27.8 | Cross-platform make |
Analytics:
Installs (30 days) | |
---|---|
kallisto |
171 |
Installs on Request (30 days) | |
kallisto |
170 |
Build Errors (30 days) | |
kallisto |
14 |
Installs (90 days) | |
kallisto |
403 |
Installs on Request (90 days) | |
kallisto |
402 |
Installs (365 days) | |
kallisto |
1,338 |
Installs on Request (365 days) | |
kallisto |
1,337 |