mosdepth
Install command:
brew install mosdepthFast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
https://github.com/brentp/mosdepth
License: MIT
Development: Pull requests
Formula JSON API: /api/formula/mosdepth.json
Formula code: mosdepth.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
golden gate | ✅ |
|---|---|---|
| tahoe | ✅ | |
| sequoia | ✅ | |
| sonoma | ✅ | |
| macOS on Intel |
sonoma | ✅ |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ |
Current versions:
| stable | ✅ | 0.3.14 |
| head | ⚡️ | HEAD |
Depends on:
| htslib | 1.24 | C library for high-throughput sequencing data formats |
Depends on when building from source:
| nim | 2.2.12 | Statically typed compiled systems programming language |
Binaries:
mosdepth
Analytics:
| 30 days | 90 days | 365 days | |
|---|---|---|---|
| Installs | 7 | 45 | 45 |
| Installs on Request | 7 | 45 | 45 |
| Build Errors | 0 |