samtools

Install command:
brew install samtools

Tools for manipulating next-generation sequencing data

https://www.htslib.org/

License: MIT

Formula JSON API: /api/formula/samtools.json

Bottle JSON API: /api/bottle/samtools.json

Formula code: samtools.rb on GitHub

Bottle (binary package) installation support provided for:

Intel monterey
big sur
catalina
64-bit linux
Apple Silicon monterey
big sur

Current versions:

stable 1.16.1

Depends on:

htslib 1.16 C library for high-throughput sequencing data formats

Analytics (macOS):

Installs (30 days)
samtools 1,420
Installs on Request (30 days)
samtools 1,388
Build Errors (30 days)
samtools 0
Installs (90 days)
samtools 3,712
Installs on Request (90 days)
samtools 3,602
Installs (365 days)
samtools 11,041
Installs on Request (365 days)
samtools 10,637

Analytics (Linux):

Installs (30 days)
samtools 67
Installs on Request (30 days)
samtools 52
Build Errors (30 days)
samtools 0
Installs (90 days)
samtools 176
Installs on Request (90 days)
samtools 145
Installs (365 days)
samtools 855
Installs on Request (365 days)
samtools 706
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