snakemake
Install command:
brew install snakemakePythonic workflow system
https://snakemake.readthedocs.io/
License: MIT
Formula JSON API: /api/formula/snakemake.json
Formula code: snakemake.rb on GitHub
Bottle (binary package) installation support provided for:
| Apple Silicon | sonoma | ✅ |
|---|---|---|
| ventura | ✅ | |
| monterey | ✅ | |
| Intel | sonoma | ✅ |
| ventura | ✅ | |
| monterey | ✅ | |
| 64-bit linux | ✅ | |
Current versions:
| stable | ✅ | 7.32.4 |
| head | ⚡️ | HEAD |
Revision: 2
Depends on:
| cbc | 2.10.11 | Mixed integer linear programming solver |
| docutils | 0.20.1 | Text processing system for reStructuredText |
| python-certifi | 2023.11.17 | Mozilla CA bundle for Python |
| python-markupsafe | 2.1.3 | Implements a XML/HTML/XHTML Markup safe string for Python |
| python-packaging | 23.2 | Core utilities for Python packages |
| python-psutil | 5.9.6 | Cross-platform lib for process and system monitoring in Python |
| python-setuptools | 69.0.2 | Easily download, build, install, upgrade, and uninstall Python packages |
| python-tabulate | 0.9.0 | Pretty-print tabular data in Python |
| python@3.12 | 3.12.0 | Interpreted, interactive, object-oriented programming language |
| pyyaml | 6.0.1 | YAML framework for Python |
Depends on when building from source:
| rust | 1.74.0 | Safe, concurrent, practical language |
Analytics:
| Installs (30 days) | |
|---|---|
snakemake |
138 |
| Installs on Request (30 days) | |
snakemake |
138 |
| Build Errors (30 days) | |
snakemake |
0 |
| Installs (90 days) | |
snakemake |
513 |
| Installs on Request (90 days) | |
snakemake |
512 |
| Installs (365 days) | |
snakemake |
1,589 |
| Installs on Request (365 days) | |
snakemake |
1,589 |
