snakemake

Install command:
brew install snakemake

Pythonic workflow system

https://snakemake.readthedocs.io/

License: MIT

Formula JSON API: /api/formula/snakemake.json

Formula code: snakemake.rb on GitHub

Bottle (binary package) installation support provided for:

Apple Silicon sequoia
sonoma
ventura
monterey
Intel sonoma
ventura
monterey
64-bit linux

Current versions:

stable 8.20.3
head ⚡️ HEAD

Depends on:

cbc 2.10.12 Mixed integer linear programming solver
certifi 2024.8.30 Mozilla CA bundle for Python
libyaml 0.2.5 YAML Parser
python@3.12 3.12.6 Interpreted, interactive, object-oriented programming language

Depends on when building from source:

rust 1.81.0 Safe, concurrent, practical language

Analytics:

Installs (30 days)
snakemake 407
Installs on Request (30 days)
snakemake 407
Build Errors (30 days)
snakemake 3
Installs (90 days)
snakemake 768
Installs on Request (90 days)
snakemake 766
Installs (365 days)
snakemake 3,379
snakemake --HEAD 6
Installs on Request (365 days)
snakemake 3,377
snakemake --HEAD 6
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