snakemake

Install command:
brew install snakemake

Pythonic workflow system

https://snakemake.readthedocs.io/

License: MIT

Formula JSON API: /api/formula/snakemake.json

Formula code: snakemake.rb on GitHub

Bottle (binary package) installation support provided for:

Apple Silicon sonoma
ventura
monterey
Intel sonoma
ventura
monterey
64-bit linux

Current versions:

stable 7.32.4
head ⚡️ HEAD

Revision: 2

Depends on:

cbc 2.10.11 Mixed integer linear programming solver
docutils 0.20.1 Text processing system for reStructuredText
python-certifi 2023.11.17 Mozilla CA bundle for Python
python-markupsafe 2.1.3 Implements a XML/HTML/XHTML Markup safe string for Python
python-packaging 23.2 Core utilities for Python packages
python-psutil 5.9.6 Cross-platform lib for process and system monitoring in Python
python-setuptools 69.0.2 Easily download, build, install, upgrade, and uninstall Python packages
python-tabulate 0.9.0 Pretty-print tabular data in Python
python@3.12 3.12.0 Interpreted, interactive, object-oriented programming language
pyyaml 6.0.1 YAML framework for Python

Depends on when building from source:

rust 1.74.0 Safe, concurrent, practical language

Analytics:

Installs (30 days)
snakemake 138
Installs on Request (30 days)
snakemake 138
Build Errors (30 days)
snakemake 0
Installs (90 days)
snakemake 513
Installs on Request (90 days)
snakemake 512
Installs (365 days)
snakemake 1,589
Installs on Request (365 days)
snakemake 1,589
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