sniffles
Install command:
brew install snifflesStructural variant caller for long-read sequencing data
https://github.com/fritzsedlazeck/Sniffles
License: MIT
Development: Pull requests
Formula JSON API: /api/formula/sniffles.json
Formula code: sniffles.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
golden gate | ✅ |
|---|---|---|
| tahoe | ✅ | |
| sequoia | ✅ | |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ |
Current versions:
| stable | ✅ | 2.8.1 |
Depends on:
| htslib | 1.24 | C library for high-throughput sequencing data formats |
| numpy | 2.5.3 | Package for scientific computing with Python |
| python@3.14 | 3.14.8 | Interpreted, interactive, object-oriented programming language |
| spoa | 4.1.5 | SIMD partial order alignment tool/library |
Depends on when building from source:
| pybind11 | 3.1.0 | Seamless operability between C++11 and Python |
Analytics:
| 30 days | 90 days | 365 days | |
|---|---|---|---|
| Installs | 7 | 8 | 8 |
| Installs on Request | 7 | 8 | 8 |
| Build Errors | 0 |