abricate

Install command:
brew install abricate

Find antimicrobial resistance and virulence genes in contigs

https://github.com/tseemann/abricate

License: GPL-2.0-only

/api/formula-linux/abricate.json (JSON API)

/api/bottle-linux/abricate.json (Bottle JSON API)

Linux formula code on GitHub

Bottle (binary package) installation support provided for Linux platforms:

Intel big sur
catalina
mojave
64-bit linux
ARM64 big sur

Current versions:

stable 1.0.1
head ⚡️ HEAD

Depends on:

bioperl 1.7.8 Perl tools for bioinformatics, genomics and life science
blast 2.12.0 Basic Local Alignment Search Tool
openssl@1.1 1.1.1l Cryptography and SSL/TLS Toolkit
perl 5.34.0 Highly capable, feature-rich programming language
unzip 6.0 Extraction utility for .zip compressed archives

Depends on when building from source:

cpanminus 1.9019 Get, unpack, build, and install modules from CPAN

Analytics:

Installs (30 days)
abricate 0
Installs on Request (30 days)
abricate 0
Build Errors (30 days)
abricate 0
Installs (90 days)
abricate 0
Installs on Request (90 days)
abricate 0
Installs (365 days)
abricate 0
Installs on Request (365 days)
abricate 0
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