abricate
Install command:
brew install abricateFind antimicrobial resistance and virulence genes in contigs
https://github.com/tseemann/abricate
License: GPL-2.0-only
Development: Pull requests
Formula JSON API: /api/formula/abricate.json
Formula code: abricate.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
tahoe | ✅ |
|---|---|---|
| sequoia | ✅ | |
| sonoma | ✅ | |
| macOS on Intel |
sonoma | ✅ |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ |
Current versions:
| stable | ✅ | 1.4.0 |
| head | ⚡️ | HEAD |
Revision: 1
Depends on:
| any2fasta | 0.8.1 | Convert various sequence formats to FASTA |
| bioperl | 1.7.8 | Perl tools for bioinformatics, genomics and life science |
| blast | 2.17.0 | Basic Local Alignment Search Tool |
Uses from macOS: perl, unzip
Binaries:
abricate,
abricate-get_db
Analytics:
| 30 days | 90 days | 365 days | |
|---|---|---|---|
| Installs | 24 | 99 | 358 |
| Installs on Request | 24 | 99 | 358 |
| Build Errors | 0 |