abricate

Install command:
brew install abricate

Find antimicrobial resistance and virulence genes in contigs

https://github.com/tseemann/abricate

License: GPL-2.0-only

Formula JSON API: /api/formula/abricate.json

Bottle JSON API: /api/bottle/abricate.json

Formula code: abricate.rb on GitHub

Bottle (binary package) installation support provided for:

Intel monterey
big sur
catalina
mojave
64-bit linux
Apple Silicon big sur

Current versions:

stable 1.0.1
head ⚡️ HEAD

Depends on:

bioperl 1.7.8 Perl tools for bioinformatics, genomics and life science
blast 2.12.0 Basic Local Alignment Search Tool
openssl@1.1 1.1.1m Cryptography and SSL/TLS Toolkit
perl 5.34.0 Highly capable, feature-rich programming language

Depends on when building from source:

cpanminus 1.9019 Get, unpack, build, and install modules from CPAN

Analytics (macOS):

Installs (30 days)
abricate 14
Installs on Request (30 days)
abricate 14
Build Errors (30 days)
abricate 0
Installs (90 days)
abricate 40
Installs on Request (90 days)
abricate 40
Installs (365 days)
abricate 114
Installs on Request (365 days)
abricate 113

Analytics (Linux):

Installs (30 days)
abricate 26
Installs on Request (30 days)
abricate 24
Build Errors (30 days)
abricate 0
Installs (90 days)
abricate 33
Installs on Request (90 days)
abricate 29
Installs (365 days)
abricate 35
Installs on Request (365 days)
abricate 31
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