kallisto

Quantify abundances of transcripts from RNA-Seq data

https://pachterlab.github.io/kallisto/

/api/formula-linux/kallisto.json (JSON API)

Linux formula code on GitHub

Current versions:

stable 0.46.1
bottle 🍾 catalina, mojave, high_sierra, x86_64_linux

Depends on:

hdf5 1.10.6 File format designed to store large amounts of data

Depends on when building from source:

autoconf 2.69 Automatic configure script builder
automake 1.16.1 Tool for generating GNU Standards-compliant Makefiles
cmake 3.16.3 Cross-platform make

Analytics:

Installs (30 days)
kallisto 17
Installs on Request (30 days)
kallisto 16
Build Errors (30 days)
kallisto 0
Installs (90 days)
kallisto 44
Installs on Request (90 days)
kallisto 42
Installs (365 days)
kallisto 172
Installs on Request (365 days)
kallisto 141
Fork me on GitHub