Bayesian haplotype-based genetic polymorphism discovery and genotyping
https://github.com/freebayes/freebayes
License: MIT
Formula JSON API: /api/formula/freebayes.json
Formula code: freebayes.rb
on GitHub
Bottle (binary package) installation support provided for:
Apple Silicon | sequoia | ✅ |
---|---|---|
sonoma | ✅ | |
ventura | ✅ | |
Intel | sonoma | ✅ |
ventura | ✅ | |
64-bit linux | ✅ |
Current versions:
stable | ✅ | 1.3.8 |
head | ⚡️ | HEAD |
Depends on:
htslib | 1.21 | C library for high-throughput sequencing data formats |
xz | 5.6.3 | General-purpose data compression with high compression ratio |
Depends on when building from source:
cmake | 3.31.2 | Cross-platform make |
pybind11 | 2.13.6 | Seamless operability between C++11 and Python |
simde | 0.8.2 | Implementations of SIMD intrinsics for systems which don't natively support them |
libomp | 19.1.5 | LLVM's OpenMP runtime library |
meson | 1.6.0 | Fast and user friendly build system |
ninja | 1.12.1 | Small build system for use with gyp or CMake |
pkgconf | 2.3.0 | Package compiler and linker metadata toolkit |
Analytics:
Installs (30 days) | |
---|---|
freebayes |
30 |
Installs on Request (30 days) | |
freebayes |
29 |
Build Errors (30 days) | |
freebayes |
0 |
Installs (90 days) | |
freebayes |
87 |
Installs on Request (90 days) | |
freebayes |
86 |
Installs (365 days) | |
freebayes |
398 |
Installs on Request (365 days) | |
freebayes |
355 |