baysor
Install command:
brew install baysorBayesian segmentation of imaging-based spatial transcriptomics data
https://github.com/kharchenkolab/Baysor
License: MIT
Development: Pull requests
Formula JSON API: /api/formula/baysor.json
Formula code: baysor.rb on GitHub
Bottle (binary package) installation support provided for:
| macOS on Apple Silicon |
golden gate | ✅ |
|---|---|---|
| tahoe | ✅ | |
| sequoia | ✅ | |
| Linux | ARM64 | ✅ |
| x86_64 | ✅ |
Current versions:
| stable | ✅ | 0.9.0 |
| head | ⚡️ | HEAD |
Depends on:
| apache-arrow | 25.0.1 | Columnar in-memory analytics layer designed to accelerate big data |
| fmt | 12.2.0 | Open-source formatting library for C++ |
| gmp | 6.3.0 | GNU multiple precision arithmetic library |
| hdf5 | 2.2.0 | File format designed to store large amounts of data |
| libtiff | 4.7.2 | TIFF library and utilities |
| mpfr | 4.2.2 | C library for multiple-precision floating-point computations |
| spdlog | 1.17.0 | Super fast C++ logging library |
Depends on when building from source:
| cgal | 6.2.1 | Computational Geometry Algorithms Library |
| cmake | 4.4.4 | Cross-platform make |
| eigen | 5.0.1 | C++ template library for linear algebra |
| nlohmann-json | 3.12.0 | JSON for modern C++ |
Analytics:
| 30 days | 90 days | 365 days | |
|---|---|---|---|
| Installs | 5 | 5 | 5 |
| Installs on Request | 5 | 5 | 5 |
| Build Errors | 0 |