breseq

Install command:
brew install breseq

Computational pipeline for finding mutations in short-read DNA resequencing data

https://barricklab.org/breseq

License: GPL-2.0-or-later AND MIT AND BSD-3-Clause

Formula JSON API: /api/formula/breseq.json

Formula code: breseq.rb on GitHub

Bottle (binary package) installation support provided for:

macOS on
Apple Silicon
sequoia
sonoma
ventura
macOS on
Intel
sonoma
ventura
Linux ARM64
x86_64

Current versions:

stable 0.39.0
head ⚡️ HEAD

Depends on:

bowtie2 2.5.4 Fast and sensitive gapped read aligner
r 4.5.0 Software environment for statistical computing

Depends on when building from source:

autoconf 2.72 Automatic configure script builder
automake 1.18 Tool for generating GNU Standards-compliant Makefiles
libtool 2.5.4 Generic library support script

Analytics:

Installs (30 days)
breseq 12
Installs on Request (30 days)
breseq 12
Build Errors (30 days)
breseq 0
Installs (90 days)
breseq 12
Installs on Request (90 days)
breseq 12
Installs (365 days)
breseq 12
Installs on Request (365 days)
breseq 12
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